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What Is The Difference Between A Regular 13c Nmr And A 13c Nmr Registered In A Proton Coupled Mode?

Open access peer-reviewed affiliate

1H and 13C NMR for the Profiling of Natural Product Extracts: Theory and Applications

Submitted: June 2nd, 2017 Reviewed: September 18th, 2017 Published: Dec 6th, 2017

DOI: 10.5772/intechopen.71040

Abstract

Nuclear magnetic resonance (NMR) spectroscopy and mass spectrometry (MS) are the primary methods of metabolomics, the branch of '-omics' that deals with small molecules. Although MS is gaining popularity in metabolomics, NMR enjoys a number of primal advantages because information technology is nondestructive, unbiased, quantitative, does not require separation or derivatization, and is amenable to compounds that are hard to analyze past gas chromatography-mass spectrometry (GC-MS) and liquid chromatography-mass spectrometry (LC-MS). At that place are two general approaches to the employ of NMR for profiling studies: an untargeted arroyo, which uses chemometric analysis; and a targeted approach, which aims to quantify known compounds in the extract. These approaches, yet, are not mutually exclusive and volition likely converge in the hereafter. This paper volition draw the basic theoretical principles that should be considered to develop NMR into a standard quantitative method. Although 1H NMR is more sensitive, 13C NMR spectra are simpler with less overlapping signals and are less affected by different magnetic field strengths. Diverse applications of 1H and 13C NMR for the profiling of natural products are described. The use of two-dimensional 1H NMR has been used to overcome issues of spectral overlap. The standardization of the NMR protocol will make it a more useful tool for the profiling of natural products extracts.

Keywords

  • nuclear magnetic resonance
  • 1H NMR
  • 13C NMR
  • natural products profiling
  • metabolomics
  • chemometrics

i. Introduction

The objective of this paper is to review the applications of 1H and 13C nuclear magnetic resonance (NMR) for the quantitative profiling of plant natural products extracts and the theoretical parameters that should exist considered, if information technology is to become a more useful tool.

NMR and mass spectrometry (MS) are the principal methods of metabolomics, the branch of '-omics' that deals with small molecules. The Metabolomics Society describes metabolomics as: "the comprehensive label of the pocket-sized molecule metabolites in biological systems" [1]. NMR has a number of characteristics that meet the requirements of metabolomics: it is authentic, quantitative, comprehensive, unbiased, and is able to provide data that can be used to make up one's mind molecular structure. The review will talk over these aspects in item.

1.1. NMR and MS

Although MS techniques, such as gas chromatography-mass spectrometry (GC-MS) and liquid chromatography-mass spectrometry (LC-MS), are about usually used in metabolomics, NMR still enjoys a number of key advantages. In particular, NMR is nondestructive, unbiased, quantitative, does not crave separation or derivatization, and is acquiescent to compounds that are difficult to clarify by GC-MS and LC-MS. For example, GC-MS often requires derivatization of compounds, such as sugars and amines. LC-MS, on the other hand, mostly requires sample preparation, chromatographic separation, specific experimental and ionization conditions, instrumentation and operator skill [2]. These make information technology difficult to standardize MS assay. In contrast, NMR does not require elaborate sample training and fractionation, is highly reproducible, and is able to provide both qualitative and quantitative data on chemically diverse compounds [3, 4]. The standardization of the NMR protocol will further amend the usefulness of NMR equally a tool for the profiling of natural products extracts. Because NMR is able to find compounds only down to 0.1% level, it is not suitable for the detection of trace components. NMR is less sensitive than MS, which can observe compounds downwardly to parts per million (ppm) levels. Because of the distinct advantages of each method, NMR and MS are considered equally complementary techniques.

NMR is a quantitative spectroscopic tool because the intensity of the peaks is directly proportional to the number of nuclei. With improvements in electronics and the use of higher magnetic field strengths, the sensitivity and resolving ability of NMR has improved. Nevertheless, the lack of standardized protocols has express its quantitative application and many consider NMR mainly as a qualitative method, mainly for chemic structure determination and molecular dynamics [5].

The employ of NMR as a quantitative method has been expanding, giving rise to the term "quantitative NMR" (qNMR). The pharmaceutical industry, which has stringent requirements of analysis, has been turning to the utilize of qNMR in early drug evolution to address the need for rapid, selective, and authentic assay without requiring expensive and tedious chromatographic methods. It is too worth noting that qNMR meets the stringent regulatory standards of the pharmaceutical industry, including the International Briefing on Harmonization. qNMR has been applied mainly to 1H nuclei although 19F and 31P NMR have also been used where appropriate considering of their 100% isotopic abundance [6]. The chief advantages of qNMR are its accuracy, reproducibility, and flexibility with respect to the nature of the analyte, the only requirement being the presence of protons and carbon, and its ability to simultaneously quantify multiple analytes, particularly when validated using external scale. Quantitative 1H NMR (qHNMR) has been shown to have an accuracy and precision of ±1% and an uncertainty of measurement of less than 0.1%. This makes it suitable as a metrological technique for the certification of purity of organic compounds [seven].

There are ii full general approaches to the use of NMR for profiling or metabolomics studies. In the beginning approach, only the spectral patterns (chemical shifts and intensities) are recorded and are used to compare and group samples. In this arroyo, compounds are non initially identified. Considering statistical tools, such as master components analysis (PCA) are used, this is sometimes called a chemometric arroyo. In the second arroyo, particular compounds which are known to be present in the extract are identified and quantified using a reference spectral library. This approach is referred to as quantitative or targeted metabolomics [8]. These approaches, notwithstanding, are not mutually sectional and volition likely converge in the futurity with improved statistical tools and bigger NMR spectral databases.

Because of the large amount of data that are produced, statistical methods, known equally chemometrics, are applied to reduce the number of variables. Chemometrics is a family of statistical techniques that are practical to large sets of chemical data, such as NMR chemic shift peaks, with the objective of gaining insights into the characteristics of the samples through the utilise of graphical representation [9]. Considering chemometrics is able to process large amounts of information, it is an ideal tool for NMR which produces a lot of data (chemic shifts). This can exist used to notice patterns of groupings and correlations among natural production samples which can exist used for quality control and standardization [x]. Since chemometrics started to exist practical to NMR around the year 2000, progress has been very rapid. Chemometrics has been used to classify whole constitute samples based on their NMR profiles according to species, origin, processing treatment, age, and various quality parameters [xi].

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2. 1H and 13C NMR as profiling methods

In a talk given during the William Draper Harkins Lecture, University of Chicago in 1991, Alexander Pines mentioned that his organic chemical science colleagues at Berkeley consider two vital instruments in a research laboratory: a residue and an NMR spectrometer. His view is not surprising as decades of improvement in both instrumentation and techniques had rendered the NMR spectrometer every bit a tool of pick in characterizing molecules, from the structures of natural products and constructed organic compounds to biomolecules and organometallic complexes. NMR spectroscopy takes advantage of the interaction betwixt nuclei that are acting as tiny magnets and an external magnetic field and this provides a powerful means of probing the chemical bonding and environment of the nucleus. These phenomena are key to the applicability of 1H and 13C NMR to natural products.

2.1. 1H NMR spectroscopy

Hydrogen is present in virtually every organic molecule, and its major isotope, 1H, has an abundance of 98.985%. The 1H nucleus reports a frequency specific to its immediate vicinity in an NMR spectrum. This frequency is extremely sensitive to the electronic environs thus giving each 1H nucleus in an organic compound a type of identification number, called the NMR chemic shift. Magnetic nuclei, such as 1H, also interact with each other. In solution or liquid-state NMR spectroscopy, these interactions, chosen couplings, are observed as "splitting" of lines in an NMR spectrum. The magnitude of these couplings not only depends on the number and type of bonds separating the interacting pair of 1H nuclei but also on the spatial orientation between the nuclei. Both NMR chemical shifts and coupling constants provide immense information regarding structure and environment. Hence, NMR spectroscopy has become a powerful tool for the determination of organic structure.

These NMR interactions (chemical shifts and coupling constants), although very sensitive, are quite weak such that improvements in their detection have been 1 of the master goals of developments in NMR instrumentation. Such limitations are no longer severe. The use of pulses and information processing by Fourier transformation, beginning introduced past Ernst and Anderson [12] and the availability of high-field superconducting magnets have allowed for efficient indicate averaging such that nowadays, with an 11 T magnet (500 MHz), a 1H NMR spectrum can be obtained even from very dilute solutions (micromolar concentration).

Pulse Fourier transform NMR spectroscopy, equally in other spectroscopic methods, involves transitions between free energy levels. However, unlike other spectroscopic methods, the transition probability in an NMR excitation is the aforementioned regardless of chemical surroundings. NMR spectroscopy does not need to consider oscillator strengths or extinction coefficients, which are of import for infrared and UV-visible spectroscopy, respectively. The intensity of an NMR signal is determined solely by the excitation pulse, force of the external magnetic field, and temperature. The magnetic field strength and temperature determine the Boltzmann population difference between the two energy levels while the excitation pulse dictates the extent of the transition. Since only ane pulse is often used to excite all of the 1H nuclei in a sample, the extent of transitions is the same for all. Furthermore, the NMR chemic shift, which reflects the differences in resonance frequencies of inequivalent 1H nuclei, is very pocket-sized: the differences are in parts per meg (ppm). Hence, the Boltzmann distribution for the 2 spin states is substantially the aforementioned for every 1H in a molecule. Indeed, as early as 1963, the area under each tiptop in a 1H NMR spectrum has been shown to correspond proportionally to the number of hydrogen atoms sharing the same environment in a given chemical compound [13]. This quantitative aspect applies non merely to pure substances but likewise to mixtures. In fact, during the same yr, a successful quantitative analysis by 1H NMR spectroscopy of a mixture of aspirin, phenacetin, and caffeine was demonstrated [fourteen].

ii.2. 13C NMR spectroscopy

13C as well has a spin of ½ and is therefore likewise NMR active. Even so, considering the 13C isotope occurs at only 1.108%, it is difficult to detect. (The major carbon isotope, 12C, is not NMR-active.) David Grant and coworkers published a series of papers on 13C NMR spectroscopy that spanned ii decades [15, 16]. In the first paper of this series, inherent difficulties in observing 13C NMR spectra were addressed by proton decoupling and sample spinning. Since carbon atoms are frequently attached to hydrogen atoms in organic compounds, 13C-1H coupling is nowadays and leads to splitting of 13C resonances. Proton decoupling removes this interaction, consolidating multiple 13C peaks into a single taller acme. Moreover, boosted enhancement of 13C signals is observed when the 1H spin populations are perturbed, similar to the effect observed by Overhauser with electron spins [17]. Taking advantage of both the nuclear Overhauser effect (NOE) and the increased signal due to the plummet of multiple peaks, measurement of 13C NMR spectra became routine and easy to interpret. Existence in the proximity of more than one pair of electrons, 13C nuclei offer a much wider range of chemic shifts than 1H (200 ppm for 13C versus 10 ppm for 1H). In add-on, since the probability that a 13C nucleus is fastened to some other 13C nucleus is very small (about 0.0001), 13C-13C couplings are usually not observed thereby providing a much simpler 13C NMR spectrum.

Using 13C NMR spectroscopy every bit a powerful analytical tool can be easily appreciated by because the 3 isomers of a uncomplicated hydrocarbon CfiveH12 (see Figure i). n-Pentane (CHiiiCHtwoCH2CH2CH3), produces three peaks with a 1:2:ii intensity ratio, two-methylbutane ((CHiii)2CHCHiiCHiii) displays four peaks with a 1:1:2:ane intensity ratio, and neopentane ((CH3)4C) gives two peaks of 4:1 intensity ratio. For the above reasons, a qualitative and quantitative assay that is nondestructive and requires no separation is possible with 13C NMR spectroscopy [xviii]. All that one needs is a library of 13C NMR spectra of all possible components, a proficient spectral prediction software, and an efficient algorithm that tin do the search and construct a imitation spectrum that matches the observed spectrum. All of these requirements are already bachelor today. A like handling has been shown to be feasible in determining the acyl profile in various vegetable oils [19] and in characterizing the diverse sesquiterpenes in essential oils from juniper, rosemary, cedarwood, and ginger [xx].

Figure 1.

13C NMR spectra of (a) n-pentane, (b) ii-methylbutane, and (c) neopentane.

The hope of a wealth of information that NMR spectroscopy offers, notwithstanding, comes also with challenges. Since the frequencies observed depend on the magnetic field strength, the peaks' shapes and widths are sensitive to the homogeneity of the magnetic field throughout the sample. Experimentally, corrections to field homogeneity are washed through a process called shimming, which involves adding small magnetic field gradients. Shimming used to be an art and both symmetry and narrowness of an NMR tiptop depended on the expertise of the NMR operator. Fortunately, with new superconducting magnets and automatic shimming, 13C NMR spectra can now be fabricated reproducible and comparable regardless of who operates the spectrometer. However, at that place are still numerous factors that are contained of the NMR operator which can affect the appearance of an NMR spectrum.

2.three. NMR chemical shifts and coupling constants

Since the frequencies (in hertz) observed for each NMR-active nucleus are dependent on the field strength, chemical shifts are reported in dimensionless units of parts per million (ppm), which then becomes independent of the magnetic field strength. Interactions betwixt nuclei, on the other hand, are independent of field strength, so these are recorded in units of frequency, hertz. Since the ppm equivalent of a hertz is determined by the strength of the magnetic field, splittings will appear narrower in a high-field magnet than in a depression-field magnet. When the coupling interactions are of the same magnitude as the chemical shift differences, the coupling blueprint is complex [21]. A hypothetical example for 1H NMR is shown in Figure two, where the coupling constant is equal to the chemical shift difference in a spectrometer operating with a 1H frequency of 100 MHz. Every bit the forcefulness of the magnetic field increases, chemical shift differences (in hertz) also increase, which can dramatically change the appearance of the spectrum. In this particular example, the spectrum only begins to announced simpler with a spectrometer operating at i GHz, in which the chemical shift difference is now 10 times bigger than the coupling constant; this is called a offset-order spectrum. Thus, 1H spectra taken at different magnetic field strengths announced dissimilar. On the other hand, 13C spectra appear similar at different magnetic field strengths. This is because 13C-13C coupling is not observed due to low natural abundance, 13C-1H couplings, although present, are always several orders of magnitude lower than the frequency difference between these 2 nuclei, and proton-decoupled 13C NMR spectra are singlets. Therefore, although 13C presents detection challenges due to its lower frequency and low natural abundance, 13C has the reward over 1H with regard to simplicity of NMR spectra.

Figure 2.

1H NMR spectra of strongly coupled nuclei at various magnetic field strengths.

Accented frequencies for NMR transitions are seldom used since these numbers are dependent on the strength of the external magnetic field. Chemical shift differences are instead reported in ppm, which is the ratio of the absolute frequency with respect to the frequency of a reference compound, such equally tetramethylsilane (TMS). Alternatively, the solvent can be utilized as internal reference. Due to the sensitivity of the NMR chemical shift, intermolecular effects are also oftentimes observed [22]. Since solvents are known to induce shifts, it is important that when comparing different spectra, the same solvent should exist used. Since 13C has a much wider chemical shift range, the upshot of solvent on chemical shift is smaller for 13C (2/200) than that of 1H (0.vii/10). Furthermore, since carbon atoms, different hydrogen atoms, reside on the interior of the molecule, 13C is generally shielded from environmental furnishings, such every bit intermolecular interactions and solvent furnishings. This is one reason why 13C NMR chemical shifts are most exclusively dependent but on its covalent bonding interactions [23]. The greater susceptibility of 1H NMR chemical shifts to solvent furnishings makes 13C NMR spectroscopy a ameliorate alternative in profiling natural products. Solvent effects on both 1H and 13C NMR chemical shifts are expected to be dominated past van der Waals interactions with the solvent. These interactions are largely nonspecific thus an approximation that the solvent simply causes a abiding start on all resonances may exist valid. Using an internal reference can therefore easily remove furnishings of the medium on the observed chemic shifts. Attention, withal, is all the same required for sites that tin participate in electrostatic interactions and hydrogen bonding. 13C in carbonyl groups is one example [24].

Temperature tin too bear on observed chemical shifts through changes in the density of the sample also as changes in the internal motions of the molecule [25]. For a fair comparison of library and sample spectra, it is of import that spectra are taken at the same temperature.

Lastly, a quantitative 13C NMR spectrum requires uniform excitation of all 13C nuclei. The wider chemical shift range and lower frequency for 13C necessitate excitation pulses with much college ability with a pulse that is less than xv ÎĽs long and so that the entire chemical shift range is uniformly irradiated [26]. Furthermore, proton decoupling is as well regularly used to collapse multiple 13C peaks, but this can pb to NOEs which raise 13C nuclei that are straight leap to protons, making 13C NMR no longer uniform for carbon nuclei with different numbers of attached protons. The inverse-gated 13C NMR experiment tin exist used to overcome these problems. This involves turning the proton decoupler on only during acquisition and providing adequate time for all the 13C nuclei to relax [27]. 13C nuclei are most often relaxed past a nearby 1H nucleus. Thus, the needed relaxation time (equal to 5 × T i) tin can be quite long for compounds that contain fourth carbons. These quaternary 13C nuclei may require minutes to relax and this dramatically increases the time required for NMR experiments. Because running such a lengthy 13C NMR experiment is not practical, information technology is normal exercise to run proton-decoupled 13C NMR using standard conditions and to apply the resulting spectra for pattern recognition but not for quantitation.

two.4. Reproducibility of NMR spectra

The employ of a library of NMR spectra in the analysis of a mixture of natural products requires reproducibility of both chemical shift and superlative intensity. Since samples of natural products are frequently dissolved in either dimethyl sulfoxide or methanol, confining both library and sample data to these 2 solvents tin easily ameliorate the confounding effects of the solvent on the observed chemic shifts. Modernistic NMR spectrometers are normally equipped with temperature control and so the measurements tin can be made at a given temperature, which as well avoids the temperature dependence of NMR chemical shifts, thus eliminating this trouble. The reproducibility of pinnacle intensities, yet, requires additional considerations.

The robustness of current NMR instrumentation is evident in successful indirect detection methods during which resonances from 1H nuclei spring to 12C are separated from those fastened to 13C [28]. Indirect detection is possible only if the scans or transients are highly reproducible such that these tin exist added to excerpt the desired resonances and remove completely the unwanted signals. However, this robustness only entails the reproducibility of an NMR experiment from one transient to the next. It does not address the reproducibility of NMR experiments among different laboratories. Thus, there is a need to standardize both NMR acquisition conditions and processing parameters.

The intensity of an NMR top depends on the duration of the pulse. Equalizing the m = +½ and m = −½ spin populations requires what is called in NMR spectroscopy as a xc° pulse. Peak intensities are at a maximum with this pulse. Since all nuclei in a sample are field of study to the aforementioned pulse, information technology is non necessary that a 90° pulse is always employed. For an NMR spectrum to be quantitative, the relative, not the absolute, height intensities are sufficient. Even so, the extent of the pulse determines how much time is required for relaxation betwixt transients. For signal averaging to be effective, 1 still needs to brand sure that the spins have reached equilibrium earlier applying the side by side pulse so every bit to avert saturation, which leads to loss of signal [29]. When a 90° pulse is employed, the time between transients must exist at least v times equally long as the relaxation time. The fourth dimension required between pulses can be reduced past using a smaller flip angle. For case, a 30° pulse requires a delay that is three times shorter. This reduces the top intensity for each scan but reduces the delay time required between scans enabling the conquering of more scans for the same amount of time. Another parameter that tin affect the appearance of an NMR spectrum is acquisition fourth dimension, which determines spectral resolution. What is straight acquired from an NMR experiment is a free induction decay (FID), which still needs to exist processed to produce the frequency spectrum. During processing, apodization, cipher-filling, and baseline and phase corrections are normally applied. All of these can significantly modify the integrated areas under the peaks of an NMR spectrum. Thus, a listing of universal parameters for quantitative NMR has been established past national and international round robin tests [xxx] which includes temperature (300 Thousand), pulse angle (30°), preacquisition delay (five due south), acquisition time (iii.4 s), relaxation delay (seven/iii of relaxation fourth dimension), and line broadening (0.3 Hz). For processing, careful transmission phase and baseline corrections are recommended since automated features of popular NMR processing software packages are unreliable. This validation has been performed with 1H NMR, simply these can be applied to 13C. With 13C, relaxation times are appreciably longer so relaxation agents such equally paramagnetic compounds have been used as in the earlier piece of work on petroleum distillates [31].

ii.v. Sensitivity and dynamic range

For the unbiased profiling of natural products extracts, one needs to consider the problems of sensitivity and dynamic range. A natural product extract typically contains major and small components. Oft, in order to detect minor components, it is necessary to employ separation techniques, such equally successive fractionation and chromatography which have the effect of increasing sensitivity to minor constituents and improving dynamic range. Nevertheless, this introduces bias.

Limits of detection and quantification are often given in terms of indicate to noise ratios. The International Conference on Harmonization of Technical Requirements recommends a signal to noise ratio of iii and ten for the detection limit and quantification limit, respectively (ICH Proficient Working Grouping, 1994). In practice, for fault values less than ane%, a signal to noise ratio of 150 is recommended [30]. The signal-to-dissonance ratio (South/N) in NMR spectroscopy nevertheless depends not only on concentration but also on other factors [32]:

In this equation, N is concentration, Îłn is the magnetogyric ratio of the nucleus, B 0 is the strength of the external field, T 2 is the transverse relaxation time, ns is the number of transients, and T is temperature. Considering both magnetogyric ratio and natural abundance, one can therefore estimate that the detection limit for 13C will be orders of magnitude higher than that of 1H. Since the number of transients depends on how much time is available for information acquisition, one can improve S/N by only taking more scans for 13C measurements. Since nuclei with longer relaxation times give sharper lines, these likewise yield higher S/North, making the detection limit dependent on the size of the molecule and the solvent. The above equation does not include factors dependent on the spectrometer's probe, receiver, and filters. In an analysis of diesel, detection limits of 0.01 and 0.5 mol% are cited for 1H and 13C, respectively [33].

Some other consideration is dynamic range. For 1H NMR, signals arising from the solvent, in particular h2o, tin can easily use up virtually of the higher $.25 in a spectrometer'south digitizer thereby decreasing the precision of signals coming from the natural product constituents. This can exist alleviated past suppressing solvent resonances, just this introduces the problem of reproducibility between runs and remains a trouble for components which have signals near the solvent.

A quantitative comparison using three magnetic field strengths—300, 400, and 500 MHz—showed that there was no difference in the sensitivity and that the standard protocol could differentiate plant samples which were spiked with 0.2 mg/mL of rutin (MW 610.5; 328 ÎĽM). This is due to the mild dependence of South/N on the field force.

For the awarding of 1H NMR for design recognition, the employ of the magnitude spectrum has been suggested [34]. The standard 1H NMR spectrum utilizes the phase-corrected existent component of the Fourier transform of the free induction decay (FID), discarding the imaginary component. This yields the absorption spectrum which is useful for normal qualitative assay due to its practiced peak resolution. Withal, this procedure sacrifices reproducibility. The use of the magnitude spectrum, which utilizes the absolute value of both the existent and imaginary components of the FID improves the reproducibility of the spectra thereby improving its accuracy for pattern recognition. This method is applicable to one-dimensional 1H NMR.

Top integrals in an NMR spectrum unfortunately are also sensitive to data processing. Apodization, zero-filling, phase and baseline corrections, and the integration itself can affect the signal-to-noise ratio of an NMR spectrum. Thus, the electric current limit in the sensitivity of NMR-based metabolomics is not due to magnetic field strength, merely is due to the current data processing methodology which uses spectral binning (alternatively called bucketing) and PCA. The usual bin size for 1H NMR is 0.04 ppm. This divides a 10 ppm 1H spectrum into 250 bins, which effectively becomes the resolution of the method. A smaller bin size can be used if the variability in the chemical shift tin can be minimized. Another trouble observed is the effect of different solvent (run across below) to move the position of chemic shifts, which will make identification using database comparisons hard [35].

2.half dozen. Event of solvent

Because institute samples incorporate a wide variety of compounds with corresponding differences in polarity, the solvent used for extraction and the NMR assay is very important. The solvent organization must remainder the power to perform a comprehensive extraction with solvent complication and reproducibility. In particular, multi-component solvent systems are prone to variation, and if there is a broad departure in vapor pressures (humid points), the solvent limerick may modify if care is not taken. Acetone and acetonitrile are effective solvents simply their use is limited by their low boiling points. The use of methanol-D4 in combination with deuterated h2o (one:1) accept been reported. By using these deuterated solvents, the extracts tin can be measured direct after extraction without need for evaporation and reconstitution. However, utilise of h2o will innovate a strong h2o elevation in the 1H NMR spectrum that must be irradiated. This becomes a source of variability around the water peak across dissimilar operators and instruments. To avoid shifts due to differences of pH in 1H NMR measurements a buffer, such as KH2PO4, is used [36].

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3. Recent applications

NMR is capable of providing simultaneous access to both qualitative (chemic structure) and quantitative data. Unfortunately, NMR has been more generally associated with multidimensional qualitative NMR used in structural analysis and qNMR has been living under this shadow. Fan (1996) pointed out that comprehensive metabolite profiling of complex food products can exist done using i- and two-dimensional NMR assay [37]. However, it is in the apply of NMR combined with chemometric methods that the extraordinary potential of both the qualitative and quantitative applications accept been realized [38].

In view of its power to be used as an exhaustive molecular fingerprinting technique, 1H NMR has been plant to be a suitable method for the identification, quality command, and fraud detection of essential oils, a role normally reserved for GC-MS [39]. NMR fingerprinting involves obtaining 1H or 13C spectra of whole solvent extracts nether standardized conditions and ignoring, at least initially, the assignment of peaks. Multivariate statistical methods, such every bit PCA, are used to compare spectra from the samples to identify clusters and then that inferences can exist drawn about the classification of individual plant samples. The identities of metabolites responsible for differences between groups can exist investigated from loadings plots generated by PCA [40]. The following section will cover applications of 1H NMR in one- and 2-dimensions and 13C NMR together with the statistical tools.

3.1. Metabolomic profiling using 1H NMR

One-dimensional 1H NMR (1D HNMR) tin can be used in the untargeted and targeted fashion. The earliest utilize of 1D HNMR for the profiling of complex extracts had the objective of monitoring the major components of exudates of plants, such as its root system. The relative increase or decrease of primary metabolites, such every bit lactate, ethanol, and certain amino acids, could exist observed [41]. Notwithstanding, its application to natural product compounds is more than challenging due to their more complex structures and lower concentrations. Considering of its simplicity and speed, 1D HNMR in the untargeted mode tin be used past itself or equally a first-pass screening to obtain cluster and contour data using HCA and PCA [42]. The majority of HNMR studies combine 1D HNMR for PCA analysis with 2-dimensional homonuclear (1H-1H) or heteronuclear (1H-13C) NMR methods for identification of natural product metabolites.

3.ane.1. One-dimensional 1H NMR

This section discusses applications that brand use of 1D HNMR lone. The number of such studies is limited because of the presence of overlapping signals and the need for high magnetic fields. 1D HNMR at 500 MHz was used to authenticate grapes for wine making past analyzing their pare and pulp at maturity. Spectral information were reduced by binning using 0.04 ppm bin size and normalized to generate 183 variables to draw each spectrum. Chemometric methods, in particular PCA and partial least squares (PLS), enabled the identification of compounds that contributed to differences between berries, due to the sugars (glucose, fructose, and sucrose), organic acids (tartaric, malic, citric, and succinic acids), and amino acids (proline, arginine, gamma-aminobutyric acrid, valine, alanine, leucine, and isoleucine) [43].

A set up of green teas selected from a Japanese tea competition were analyzed by 1D HNMR at 750 MHz to allocate tea quality with respect to that judged by tea tasters and to propose a quality prediction model. PCA metabolomics profiling revealed a separation between the high- and the depression-quality green teas. The sense of taste mark compounds contributing to the bigotry of tea quality were identified from 1D HNMR every bit caffeine, theanine, epigallocatechin-3-gallate, epigallocatechin, epicatechin-3-gallate, and epicatechin [44].

The use of the magnitude spectrum showed good reproducibility in the analysis of 4 diverse natural product samples (12 tea extracts, eight liquor samples, 9 hops extracts, and 25 cannabis extracts) using 1D HNMR at 500-MHz and diverse statistical tools [45].

3.i.2. Ii-dimensional 1H NMR

Because of problems of bespeak overlaps in 1D HNMR spectra, two-dimensional NMR techniques are usually used to overcome these limitations. The 2d methods include 1H J -resolved NMR (2D JNMR), 1H-1H correlation spectroscopy (2d COSY) and total correlation spectroscopy (2D TOCSY), 1H-13C heteronuclear single breakthrough coherence (second HSQC), and 1H-13C heteronuclear multiple bail coherence (2D HMBC).

1D and 2D NMR at 600 MHz together with chemometric assay were used to differentiate the origin, purity, and processing methods of chamomile flowers which were obtained from three different countries. The extracts were dissolved in DtwoO phosphate buffer adjusted to pH 7.four. 1D NMR data were analyzed by PCA assay to determine the groupings past pattern recognition and second COSY and 2nd TOCSY pulse sequences were used to assign the resonances and identify constituents [46].

Several NMR-based metabolomic studies have been done on green tea ( Camellia sinensis , L.). In one report, 191 green tea samples from different countries were analyzed using 1D HNMR and 2D NMR at 400 MHz to determine origin, quality, furnishings of climate and season, growth conditions, and fifty-fifty plucking position. The highest quality Chinese tea showed higher levels of theanine, gallic acid, caffeine, epigallocatechin gallate, and epicatechin gallate and lower levels of epigallocatechin when compared with other teas. These new markers were suggested to be useful for the authentication of tea [47]. In some other study, the effects of climatic conditions (temperature, sun exposure, and precipitation) and plucking positions on the tea plant were investigated using 1D HNMR profiling combined with multivariate pattern recognition methods. Assignment of NMR signals was washed using second TOCSY, 2D HMBC, and 2D HSQC. The variations in the composition of specific tea compounds were obtained [48, 49]. The sensitivity of the NMR method at 400 MHz was demonstrated in a report on three dissimilar varieties of green tea. 1D HNMR, second JNMR, and 2D COSY spectra were run and identification of constituents was done using MestRenova version xi.0.0. The following compounds were identified: theanine, alanine, threonine, succinic acid, aspartic acid, lactic acid, caffeine, and derivatives of epigallocatechin [50].

The same strategy was used for chemotaxonomic classification of 11 South American Ilex species. Data from 1D HNMR at 600 MHz were combined with PCA, partial least square-discriminant analysis (PLS-DA), and hierarchical cluster analysis (HCA) to reveal 4 distinct groups. 1H indicate overlaps were addressed using 2D JNMR and 2D HSQC. The combined utilize of 1D- and 2D-NMR and chemometric analysis enabled unambiguous chemotaxonomic discrimination of the Ilex species and varieties [51].

1D HNMR fingerprinting followed by second TOCSY and 2D HSQC methods were used to distinguish four Asian and four Korean ginseng products, likewise as their commercial products. In this mode, the major metabolites—glutamine, arginine, sucrose, malate, and myo-inositol—were identified as chemical markers for quality balls [52]. In a study on Indian ginseng, Withania somnifera (L.) Dun., 1D HNMR profiling was performed on the leaves, stems, and roots to obtain a profile of this constitute. PCA and hierarchical cluster analysis (HCA) were performed to grouping samples which were collected from half dozen different regions of Bharat. second JNMR, 2D COSY, second HSQC, and 2D HMBC, were then used to identify specific metabolites. The ratio of 2 withanolides was found to be a key discriminating feature of Due west. somnifera foliage samples from different regions [53].

This NMR-based metabolomic strategy was practical to clarify seven spices used in traditional Mediterranean cuisine and to detect metabolic changes over dissimilar seasons. Both principal and secondary metabolites were identified and quantified. The major secondary metabolites identified were polyphenols, including flavonoids (apigenin, quercetin, and kaempferol derivatives) and phenylpropanoid derivatives (chlorogenic and rosmarinic acid). This written report was performed using a 300 MHz NMR musical instrument [54].

The application of NMR-based metabolomics method in plant breeding has been reported. Using a 500 MHz instrument, the NMR-based metabolomics was applied to the identification of saccharide beet ( Beta vulgaris L.) genotypes which were susceptible to the Cercospora leaf diseases of carbohydrate beet plants worldwide. This arroyo was able to successfully contour foliar metabolites without inoculation tests which would have required a meaning amount of time and effort. In this study, field-grown leaves which had different levels of resistance were collected from 12 sugar beet genotypes at 4 growth time points. The aqueous extracts were studied using 1D HNMR, 2D COSY, second TOCSY, and 2D HSQC. Thirty metabolites were identified and annotated using the SpinAssign plan from the PRIMe web service. PCA of the NMR data revealed articulate differences among the growth stages, in terms of the content of sugar, glycine betaine, and choline [55].

iii.2. Metabolomic profiling using 13C NMR

Because of its lower sensitivity and longer conquering fourth dimension, 13C NMR is used less oft than 1H NMR. All the same, 13C NMR spectra are simpler, have less severe problems with overlapping peaks, are more than comparable beyond different magnetic field strengths, and are less susceptible to solvent effects. In addition, the singlet nature of 13C NMR signals makes it easier to determine the identity of individual compounds in a mixture.

13C NMR methodology was used to report the triacylglycerols of the oil extracted from the seeds of Moringa oleifera , Lam. Information technology was able to simultaneously detect specific unsaturated acyl chains according to their positions on the glycerol backbone through carboxylic, olefinic, and methylene carbons [56]. However, at this time, its use was non specifically identified as a profiling method. After, 13C NMR was applied to the fingerprinting of lipids for the authentication of marine and fish oils. In this piece of work, 13C NMR was combined with chemometrics and database data and compared with relevant authentic samples [57]. 13C NMR in combination with multivariate data analysis take been used in the analysis of lipids from diverse fishes. In one application, this method was used to discriminate betwixt farmed and wild Atlantic salmon ( Salmo salar , L.), between samples from different geographical origins [58], and to detect mislabeling and adulteration [59].

13C NMR was used in a dereplication strategy for the identification of natural product compounds directly from institute extracts. The whole extract was first separated into fractions of simpler composition, which were and so analyzed by 13C NMR. The 13C spectra of all the fractions were aligned and subjected to design recognition by HCA. This yielded correlations among 13C signals within each fraction which were visualized equally chemic shift clusters, which were assigned to specific compounds in a 13C database. This strategy was applied to the analysis of 5 g of a bark extract from the African tree Anogeissus leiocarpus which resulted in the unambiguous identification of seven major compounds [sixty].

Chemic profiling and standardization of the methanol extract from the leaves of Vitex negundo , Fifty. were carried out using 13C NMR followed by chemometric analysis. Because PCA analysis gave an explained variability of simply 41% for PC1 and PC2, an alternative method, called k-means clustering, was employed. This was able to successfully differentiate samples that were deliberately allowed to degrade. The multivariate control chart, which is analogous to the analytical control chart method, classified samples whose quality exceeded the upper control limit (UCL). The plant samples were also analyzed past quantitative thin layer chromatography (qTLC) using agnuside equally marker compound. Comparison of the univariate qTLC results with the multivariate control chart showed poor correspondence: some samples that gave loftier agnuside values exceeded the UCL while others that had depression agnuside values were below the UCL. This means that a univariate assay of a plant sample using a mark compound does not fairly represent the overall plant profile [61].

13C NMR is beingness used more ofttimes for dereplication of natural production extracts without fractionation. This approach is existence enhanced by availability of 13C NMR databases and predictive software which list compounds that are most likely to be present in the extract. These results have been found to be comparable to those obtained using LC-MS and GC-MS, which require fractionation and sample training [62].

The combined apply of loftier-resolution 1H and 13C NMR analysis has the potential to reveal more details that are non available using merely i technique. This combined approach was employed to detect and quantify a wide range of triacylglycerols and their component fatty acids in marine cod liver oil supplements. The combination of 1H and 13C spectra permitted the detailed analysis of components, including sn-1 monoacylglycerols, sn-1,2- and sn-1,iii-diacylglycerol adducts, and other minor components, such as trans-fat acids, free glycerol and cholesterol, and added vitamins A and E and synthetic compounds, such as ethyl docosahexaenoate or eicosopentaenoate. The identity of each compound was confirmed using 2D COSY [63].

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4. Future prospects

The employ of 1H and 13C NMR for the profiling of natural products extracts is a rapidly growing branch of metabolomics. Information technology will further accelerate with the increasing use of NMR in quality management, the growth of NMR databases, the evolution of portable and benchtop NMR instrumentation, and advances in the use of statistical assay. Despite its considerable potential, the routine application of this method is limited by the lack of expertise to run sophisticated NMR experiments and the lack of computational tools for NMR spectral deconvolution, in particular of 1H spectra [64].

4.1. NMR in quality management

NMR has been used for the monitoring and quality management of foods, beverages, cosmetics, and pharmaceuticals. The same can be done for the profiling of natural products. In social club to ensure reproducibility and reliability and to minimize experimental artifacts, the entire process—from sample collection and storage, extraction, NMR measurement and data processing, and statistical analysis—should exist optimized and standardized [65, 66]. The NMR solvent is of detail importance because of its influence on the chemical shift positions of protons in phenolic compounds [67] and other solvent effects. This problem is more than severe for 1H every bit compared with 13C NMR.

It has been claimed that periodic calibration tin deliver accuracy every bit high as 99.9% and precision every bit adept as 0.59%, and if calibration is performed with each study, the accurateness and precision tin reach 100 and 0.35%, respectively [68]. The various experimental parameters are listed beneath:

  • Sample preparation: homogeneity of sample, extraction solvent, extraction method, and NMR solvent.

  • Conquering parameters: temperature, acquisition fourth dimension, pulse angle, number of data points, time filibuster (relaxation time), and electronic amplification.

  • NMR data processing: smoothing, stage correction, baseline correction, and indicate integration.

four.ii. NMR databases in natural products

The usefulness of NMR databases is premised on the reproducibility of the NMR experiment—starting with sample preparation, NMR acquisition, and processing—beyond unlike laboratories. It is important to avert conditions that alter the position of chemical shifts, which volition make identification using database comparisons difficult. Open-access and user-contributed 1H and 13C NMR spectral databases have a loftier potential equally a useful tool for natural products researchers provided that sample preparation, instrumentation, and acquisition parameters are standardized. For sample preparation, only selected NMR solvents should be used. Magnetic field strength is more critical for 1H than 13C NMR. Acquisition and processing parameters should exist standardized. As of 2015, 1829 1H NMR and 1383 13C NMR spectra have been available in open-access chemical databases. To further promote participation by researchers, the entire process, from information conquering, conversion of vendor-specific raw information files, and information deposition have to be simplified and standardized [69].

iv.iii. Portable and benchtop NMR instrumentation

NMR is unremarkably considered to be an expensive analytical technique which is used for research purposes but. However, for NMR to go more useful for the natural products industry where many of the companies are small to medium in size, more affordable instrumentation is needed. There have been numerous announcements regarding the development of portable and benchtop NMR instruments with full spectrum 1H and 13C NMR capability using microcoils with small portable magnets of up to ii T (approximately 85 MHz 1H) [70]. Although these are limited in capability and reproducibility compared with a full laboratory NMR musical instrument, they tin can be used in the field or production site where cryogenic liquids and stable power are not available. Considering in that location is a demand for such instrumentation for other purposes, such as forensic investigation, detection of explosives, and medical diagnostics, their evolution is certain to accelerate. This will expand the use of NMR for the profiling of natural products.

4.iv. Advances in the utilise of statistical analysis

Although the use of NMR in the analysis of biological extracts was already beingness done in the 1980s, information technology was the application of statistical methods that enabled researchers to make apply the big amount of NMR information to detect patterns and correlations. The first step unremarkably involves the simplification of large NMR data sets to discover relationships, groupings, or dependencies using PCA. Second, the groups can be classified with or without a training gear up which has known information or characteristics confronting which other sample sets are compared. Linear discriminant analysis (LDA) and soft independent modeling of class illustration (SIMCA) are used for this purpose. For quantitative analysis of constituents, in detail for strongly overlapping peaks, principal component regression (PCR) or PLS regression can be used [71]. Although these statistical techniques are now commonly used, new ones go along to be developed and reported.

One of the near exciting areas of development is the use of statistical methods to correlate NMR signals with biological activeness. Since the NMR signals can be related to specific compounds, this in effect allows 1 to correlate specific compounds with biological activeness. Although information technology has to exist emphasized that correlation is non proof of biological activeness, this strategy notwithstanding allows one to shortcut the procedure of discovering bioactive compounds in a complex natural product mixture. This also allows one to find multiple active compounds.

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five. Conclusions

1H and 13C NMR are rapidly expanding it office from its traditional use mainly every bit a qualitative spectroscopic technique for the determination of chemical structure to a quantitative tool for the metabolomic written report of natural production extracts, whether for quality control of phytomedicine products, analysis of the metabolome for establish profiling, identification of constituents as plant markers, or for plant biotechnology. A major enabler for the utilize of NMR for metabolomic studies is the application of various statistical techniques which are able to find patterns and correlations in the big NMR data sets. The continued expansion of the use of NMR for the metabolomic profiling of natural production extracts volition probable depend on the further development of statistical methods and the availability of NMR databases for both 1H and 13C nuclei. It is likely that more than compounds will exist identified as techniques are improved.

An NMR spectrum is quantitative. An agreement of the physical principles of NMR provides the theoretical basis for its apply as a quantitative tool. NMR spectroscopy does non require a standard for each component since the intensity of each point is directly proportional to the number of nuclei being observed regardless of environment. NMR spectroscopy likewise offers detailed information regarding molecular structure. Using NMR spectroscopy as a tool in the profiling of natural product extracts therefore non but provides accurate and precise composition, but too structural evidence for each of the components. Since the NMR bespeak dependence on diverse factors is already well known, resonance positions and intensities are highly reproducible. These are important characteristics which give NMR a unique advantage over other analytical methods.

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Abbreviations

1D HNMR One-dimensional 1H NMR
2D COSY Two-dimensional 1H-1H correlation spectroscopy
2D JNMR 2-dimensional 1H J-resolved spectroscopy
2D HMBC Two-dimensional 1H-13C heteronuclear multibond coherence
2D HSQC Two-dimensional, 1H-13C single quantum coherence
2D TOCSY Two-dimensional total correlation spectroscopy
GC-MS Gas chromatography-mass spectrometry
HCA Hierarchical cluster analysis
LC-MS Liquid chromatography-mass spectrometry
MS Mass spectrometry
NMR Nuclear magnetic resonance
PCA Chief components analysis
PLS Partial least squares
PLS-DA Fractional least squares-discriminant analysis
qNMR Quantitative NMR
qHNMR Quantitative proton (1H) NMR
qTLC Quantitative thin layer chromatography

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Written By

Fabian M. Dayrit and Angel C. de Dios

Submitted: June 2nd, 2017 Reviewed: September 18th, 2017 Published: Dec sixth, 2017

Source: https://www.intechopen.com/chapters/57387

Posted by: johansenwhang1968.blogspot.com

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